Omics-based in Precision Medicine ensuring quality standards
Accumulate and Validate your omics
Explore QCheck Features
Meet International Guidelines
- FDA (Guidance Documents 2016 )
- ACMG (Genet Med. 2015)
- CDC (Nat Biotechnol 2015)
- AMP/CAP (J Mol Diagn.2017)
- EuroGenTest (Eur J Hum Genet.2016)
Set Quality Standard
- Set quality verification by Third-party standards
- Increase service value
- Create test report with confidence
Build Omics Data Lake
- Store omics data and reports in large scale
- Comply with LDTs regulations
- Activity with QMS and risk management
- Open API for system integration
Ensure Security and Privacy
- Elevate data security with firewall and intrusion protections
- Certify with ISO 27001, FIPS 140-2, NIST 800-171 and GDPR
- Incident response of potential security risk
QCheck
Quality-based management system to check omics data in precision medicine
QCheck with graphic-interface, comprehensive quality item, and automatic reports for clinicians and pathologists. Assist with the omics data quality check and comply with LDTs regulations in Taiwan and international guidelines.
Sequencing Statistic
- Total Reads
- % of duplicate Reads
- Filtered Reads
- % of N content
Base Quality
- Base Quality Distribution
- GC Content Derivations
- Sequences Length Derivations
Mapping Metrics
- Average Depth of Coverage
- % of Reads Mapped to Reference Genome
- Bases in Target Region
- Mapping Quality
Variant Quality
- Ti/Tv Ratio
- Variant Types
- Genotype Quality
- Depth of Variants
- Strand Bias Distribution
Clinical Center
Hospital and health care facilities use genetic testing to confirm the pathogenic genes and help select the best medicines. Physicians need to simultaneously ensure the reliability of test reports and reduce the risk of test errors before interpret to patients.
QCheck Key Benefits
- Evidence collection & Reporting
- Provide warning and management system
- Preserve testing data and reports
Report management system
*On February 2021, Taiwan passed the amended “Regulations of Special Medical Techniques“ and added Laboratory Development Tests(LDTs). There are clear specifications for testing laboratory certification, testing data storage and operator qualifications.
Reference: https://dep.mohw.gov.tw/doma/cp-3132-43826-106.html
NGS Data QC report overview
This is for mobile view
Clinical Center
Hospital and health care facilities use genetic testing to confirm the pathogenic genes and help select the best medicines. Physicians need to simultaneously ensure the reliability of test reports and reduce the risk of test errors before interpret to patients.
QCheck Key Benefits
- Evidence collection & Reporting
- Provide warning and management system
- Preserve testing data and reports
Report management system
*On February 2021, Taiwan passed the amended “Regulations of Special Medical Techniques“ and added Laboratory Development Tests(LDTs). There are clear specifications for testing laboratory certification, testing data storage and operator qualifications.
Reference: https://dep.mohw.gov.tw/doma/cp-3132-43826-106.html
NGS Data QC report overview
Research Institutions
Academic research group and Biobank use specimens / samples of various species to obtain genomics data, such as WES、WGS and target sequencing. Before analyzing and saving these big data, it is necessary to increase the sequencing data stability and decrease the influence of the experimenter’s operation and environment.
QCheck Key Benefits
- Set parameters on quality items
- Save system maintenance manpower
- Build in-house gene database
Parameter setting of mapping metrics
QC Report of testing sample and results
This is for mobile view
Research Institutions
Academic research group and Biobank use specimens / samples of various species to obtain genomics data, such as WES、WGS and target sequencing. Before analyzing and saving these big data, it is necessary to increase the sequencing data stability and decrease the influence of the experimenter’s operation and environment.
QCheck Key Benefits
- Set parameters on quality items
- Save system maintenance manpower
- Build in-house gene database
Parameter setting of mapping metrics
QC Report of testing sample and results
Demostration
Start today and try it now !
Find Your Best Solution
| Free-trial | Basic | Standard | Professional | |
|---|---|---|---|---|
| Yearly Price (USD w/tax) | $ 3,599 | $ 17,799 | ||
| License | 7-day | 1 Distributor | 1 Distributor, 10 users | 1 Distributor, 50 users |
| Data Input | FASTQ / BAM / VCF | FASTQ / BAM / VCF | FASTQ / BAM / VCF | FASTQ / BAM / VCF / Customized files |
| QC Flow | All* | All* | All* | All* |
| Report format | View | View / .pdf | View / .pdf | View / .pdf / .csv |
| Management | _ | _ | O (item setting) | O (item setting +user role) |
| Email Notification | _ | O | O | O |
| Storage | _ | Cloud (1TB) | Local / Cloud (3TB*) | Local / Cloud (10 TB*) |
| Quota | 10 | 100# | 700# | Unlimited |
| Share files | _ | O (30 days) | O (30 days) | O (1 year ) |
| Technical Support | _ | O (Online) | O (Onsite/Online) | O (Onsite/Online) |
- *Support Storage Expansion: 1 TB + $350 (USD w/tax)
- #Support Analysis Quota Expansion: 100 times + $1400 (USD w/tax)